Phylogenetics and Phylogeography(Advanced Analytical Methods)
Lecture by Dr Sam Lycett, filmed at The Roslin Institute, March 2015.
(Recommended YouTube playback settings for the best viewing experience: 1080p HD)
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Content:
a. Principles of phylodynamics and phylogeography
b. Pathogen Phylodynamics
c. Adding Locations to Trees
d. Adding Other ‘Traits’ To Trees
e. Phylodynamic Modelling Scenarios
f. Trait Models on Trees
g. Discrete Trait Model
h. Focus on one branch
i. Transmission Patterns and Discrete Trait Models
j. HPAI H5N1 Results – by Region
k. HPAI H5N1 Results – by Host
l. Using Spatial Coordinates
m. Spatial Diffusion
n. Spatial Reconstruction